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1

Ibis T5000: a universal biosensor approach for microbiology

Ecker, David J., Sampath, Rangarajan, Massire, Christian, Blyn, Lawrence B., Hall, Thomas A., Eshoo, Mark W., Hofstadler, Steven A.

Journal:

Nature Reviews Microbiology

Year:

2008

Language:

english

File:

PDF, 645 KB

english, 2008

2

SAR by MS: Discovery of a New Class of RNA-Binding Small Molecules for the Hepatitis C Virus: Internal Ribosome Entry Site IIA Subdomain

Seth, Punit P., Miyaji, Alycia, Jefferson, Elizabeth A., Sannes-Lowery, Kristin A., Osgood, Stephen A., Propp, Stephanie S., Ranken, Ray, Massire, Christian, Sampath, Rangarajan, Ecker, David J.

Journal:

Journal of Medicinal Chemistry

Year:

2005

Language:

english

File:

PDF, 209 KB

english, 2005

3

Improved Sensitivity for Molecular Detection of Bacterial and Candida Infections in Blood

Bacconi, Andrea, Richmond, Gregory S., Baroldi, Michelle A., Laffler, Thomas G., Blyn, Lawrence B., Carolan, Heather E., Frinder, Mark R., Toleno, Donna M., Metzgar, David, Gutierrez, Jose R., Massire

Journal:

Journal of Clinical Microbiology

Year:

2014

Language:

english

File:

PDF, 1.56 MB

english, 2014

4

Complex network measures in Autism Spectrum Disorders

Sato, Joao Ricardo, Vidal, Maciel, de Siqueira Santos, Suzana, Massirer, Katlin Brauer, Fujita, Andre

Journal:

IEEE/ACM Transactions on Computational Biology and Bioinformatics

Year:

2015

Language:

english

File:

PDF, 18.08 MB

english, 2015

5

Cloning, expression and purification of kinase domains of cacao PR-1 receptor-like kinases

Tosarini, Thalita Ravazo, Ramos, Priscila Zonzini, de Souza, Gerson Profeta, Baroni, Renata Moro, Massirer, Katlin B., Couñago, Rafael M., Mondego, Jorge M.C.

Journal:

Protein Expression and Purification

Year:

2018

Language:

english

File:

PDF, 3.61 MB

english, 2018

6

Evaluation of a PCR-electrospray ionization mass spectrometry platform for detection and identification of fungal pathogens directly from prospectively collected bronchoalveolar lavage specimens

Jia, Bei, Lovari, Robert, Miller, Heather, Metzgar, David, Massire, Christian, Carolan, Heather, Toleno, Donna, D'Alessio, Franco, Rothman, Richard, Blyn, Lawrence B., Zhang, Sean X.

Journal:

Diagnostic Microbiology and Infectious Disease

Year:

2020

Language:

english

File:

PDF, 588 KB

english, 2020

7

The evolving role of microRNAs in animal gene expression

Katlin B. Massirer, Amy E. Pasquinelli

Journal:

Year:

2006

Language:

english

File:

PDF, 77 KB

english, 2006

8

DRAWNA: A program for drawing schematic views of nucleic acids

C. Massire, C. Gaspin, E. Westhof

Journal:

Journal of Molecular Graphics

Year:

1994

Language:

english

File:

PDF, 853 KB

english, 1994

9

Maintenance and differentiation of neural stem cells

Katlin B. Massirer, Cassiano Carromeu, Karina Griesi-Oliveira, Alysson R. Muotri

Journal:

Wiley Interdisciplinary Reviews: Systems Biology and Medicine

Year:

2011

Language:

english

File:

PDF, 254 KB

english, 2011

10

MANIP: an interactive tool for modelling RNA

C Massire, E Westhof

Journal:

Journal of Molecular Graphics and Modelling

Year:

1998

Language:

english

File:

PDF, 462 KB

english, 1998

11

LIN-28 co-transcriptionally binds primary let-7 to regulate miRNA maturation in Caenorhabditis elegans

Van Wynsberghe, Priscilla M, Kai, Zoya S, Massirer, Katlin B, Burton, Victoria H, Yeo, Gene W, Pasquinelli, Amy E

Journal:

Nature Structural and Molecular Biology

Year:

2011

Language:

english

File:

PDF, 776 KB

english, 2011

12

Rapid Identification of Emerging Infectious Agents Using PCR and Electrospray Ionization Mass Spectrometry

RANGARAJAN SAMPATH, THOMAS A. HALL, CHRISTIAN MASSIRE, FENG LI, LAWRENCE B. BLYN, MARK W. ESHOO, STEVEN A. HOFSTADLER, DAVID J. ECKER

Journal:

Annals of the New York Academy of Sciences

Year:

2007

Language:

english

File:

PDF, 98 KB

english, 2007

13

Structural basis for the specificity of the initiation of HIV-1 reverse transcription

Ehresmann, Chantal, Marquet, Roland, Isel, Catherine, Westhof, Eric, Massire, Christian, Le Grice, Stuart F.J., Ehresmann, Bernard

Journal:

The EMBO Journal

Year:

1999

Language:

english

File:

PDF, 685 KB

english, 1999

14

Identification of Acinetobacter Species and Genotyping of Acinetobacter baumannii by Multilocus PCR and Mass Spectrometry

Ecker, J. A., Massire, C., Hall, T. A., Ranken, R., Pennella, T.-T. D., Agasino Ivy, C., Blyn, L. B., Hofstadler, S. A., Endy, T. P., Scott, P. T.

Journal:

Journal of Clinical Microbiology

Year:

2006

Language:

english

File:

PDF, 1.84 MB

english, 2006

15

Thermal simulations in the human head for high field MRI using parallel transmission

Aurélien Massire, Martjin A. Cloos, Michel Luong, Alexis Amadon, Alexandre Vignaud, Christopher J. Wiggins, Nicolas Boulant

Journal:

Journal of Magnetic Resonance Imaging

Year:

2012

Language:

english

File:

PDF, 1006 KB

english, 2012

16

Direct broad-range detection of alphaviruses in mosquito extracts

Mark W. Eshoo, Chris A. Whitehouse, Scott T. Zoll, Christian Massire, Thuy-Trang D. Pennella, Lawrence B. Blyn, Rangarajan Sampath, Thomas A. Hall, Joseph A. Ecker, Anjali Desai, Leonard P. Wasieloski

Journal:

Year:

2007

Language:

english

File:

PDF, 1.35 MB

english, 2007

17

The Microbial Rosetta Stone Database: A compilation of global and emerging infectious microorganisms and bioterrorist threat agents

David J Ecker, Rangarajan Sampath, Paul Willett, Jacqueline R Wyatt, Vivek Samant, Christian Massire, Thomas A Hall, Kumar Hari, John A McNeil, Cornelia Büchen-Osmond, Bruce Budowle

Journal:

BMC Microbiology

Year:

2005

Language:

english

File:

PDF, 4.09 MB

english, 2005

18

Derivation of the three-dimensional architecture of bacterial ribonuclease P RNAs from comparative sequence analysis

Christian Massire, Luc Jaeger, Eric Westhof

Journal:

Journal of Molecular Biology

Year:

1998

Language:

english

File:

PDF, 3.83 MB

english, 1998

19

Regulation by let-7 and lin-4 miRNAs Results in Target mRNA Degradation

Shveta Bagga, John Bracht, Shaun Hunter, Katlin Massirer, Janette Holtz, Rachel Eachus, Amy E. Pasquinelli

Journal:

Year:

2005

Language:

english

File:

PDF, 443 KB

english, 2005

20

Identification of a novel Acinetobacter baumannii clone in a US hospital outbreak by multilocus polymerase chain reaction/electrospray-ionization mass spectrometry

Audrey N. Schuetz, Richard C. Huard, Mark W. Eshoo, Christian Massire, Phyllis Della-Latta, Fann Wu, Stephen G. Jenkins

Journal:

Diagnostic Microbiology and Infectious Disease

Year:

2012

Language:

english

File:

PDF, 340 KB

english, 2012

21

Monitoring seasonal influenza A evolution: Rapid 2009 pandemic H1N1 surveillance with an reverse transcription-polymerase chain reaction/electro-spray ionization mass spectrometry assay

Kevin Jeng, Christian Massire, Teresa R. Zembower, Varough M. Deyde, Larisa V. Gubareva, Yu-Hsiang Hsieh, Richard E. Rothman, Rangarajan Sampath, Sudhir Penugonda, David Metzgar, Lawrence B. Blyn, Jus

Journal:

Journal of Clinical Virology

Year:

2012

Language:

english

File:

PDF, 318 KB

english, 2012

22

The miR-35-41 Family of MicroRNAs Regulates RNAi Sensitivity in Caenorhabditis elegans

Massirer, Katlin B., Perez, Saida G., Mondol, Vanessa, Pasquinelli, Amy E., McManus, Michael T.

Journal:

Year:

2012

Language:

english

File:

PDF, 422 KB

english, 2012

23

New technology for rapid molecular diagnosis of bloodstream infections

Ecker, David J, Sampath, Rangarajan, Li, Haijing, Massire, Christian, Matthews, Heather E, Toleno, Donna, Hall, Thomas A, Blyn, Lawrence B, Eshoo, Mark W, Ranken, Raymond, Hofstadler, Steven A, Tang,

Journal:

Expert Review of Molecular Diagnostics

Year:

2010

Language:

english

File:

PDF, 1.05 MB

english, 2010

24

Measuring network's entropy in ADHD: A new approach to investigate neuropsychiatric disorders

Sato, João Ricardo, Takahashi, Daniel Yasumasa, Hoexter, Marcelo Queiroz, Massirer, Katlin Brauer, Fujita, André

Journal:

Year:

2013

Language:

english

File:

PDF, 593 KB

english, 2013

25

MicroRNAs that interfere with RNAi

Massirer, Katlin B., Pasquinelli, Amy E.

Journal:

Year:

2013

Language:

english

File:

PDF, 296 KB

english, 2013

26

Molecular genotyping of Acinetobacter spp. isolated in Arizona, USA, using multilocus PCR and mass spectrometry

Sarovich, D. S., Colman, R. E., Price, E. P., Massire, C., Von Schulze, A. T., Waddell, V., Anderson, S. M., Ecker, D. J., Liguori, A. P., Engelthaler, D. M., Sampath, R., Keim, P., Eshoo, M. W., Wagn

Journal:

Journal of Medical Microbiology

Year:

2013

Language:

english

File:

PDF, 254 KB

english, 2013

27

A key QTL cluster is conserved among accessions and exhibits broad-spectrum resistance toPhytophthora capsici: a valuable locus for pepper breeding

Stéphanie Mallard, Mélissa Cantet, Anne Massire, Alexandre Bachellez…

Journal:

Molecular Breeding

Year:

2013

Language:

english

File:

PDF, 1008 KB

english, 2013

28

Simultaneous Identification of Mycobacterial Isolates to the Species Level and Determination of Tuberculosis Drug Resistance by PCR Followed by Electrospray Ionization Mass Spectrometry

Massire, C., Ivy, C. A., Lovari, R., Kurepina, N., Li, H., Blyn, L. B., Hofstadler, S. A., Khechinashvili, G., Stratton, C. W., Sampath, R., Tang, Y.-W., Ecker, D. J., Kreiswirth, B. N.

Journal:

Journal of Clinical Microbiology

Year:

2011

Language:

english

File:

PDF, 1.11 MB

english, 2011

29

Rbfox proteins regulate alternative mRNA splicing through evolutionarily conserved RNA bridges

Lovci, Michael T, Ghanem, Dana, Marr, Henry, Arnold, Justin, Gee, Sherry, Parra, Marilyn, Liang, Tiffany Y, Stark, Thomas J, Gehman, Lauren T, Hoon, Shawn, Massirer, Katlin B, Pratt, Gabriel A, Black,

Journal:

Nature Structural and Molecular Biology

Year:

2013

Language:

english

File:

PDF, 3.00 MB

english, 2013

30

Analysis of Antibiotic Resistance Genes in Multidrug-Resistant Acinetobacter sp. Isolates from Military and Civilian Patients Treated at the Walter Reed Army Medical Center

Hujer, K. M., Hujer, A. M., Hulten, E. A., Bajaksouzian, S., Adams, J. M., Donskey, C. J., Ecker, D. J., Massire, C., Eshoo, M. W., Sampath, R., Thomson, J. M., Rather, P. N., Craft, D. W., Fishbain,

Journal:

Antimicrobial Agents and Chemotherapy

Year:

2006

Language:

english

File:

PDF, 1.07 MB

english, 2006

31

MANIP: an interactive tool for modelling RNA

Journal:

Journal of Molecular Graphics and Modelling

Year:

1998

Language:

english

File:

PDF, 462 KB

english, 1998

32

Design of non-selective refocusing pulses with phase-free rotation axis by gradient ascent pulse engineering algorithm in parallel transmission at 7T

Massire, Aurélien, Cloos, Martijn A., Vignaud, Alexandre, Le Bihan, Denis, Amadon, Alexis, Boulant, Nicolas

Journal:

Journal of Magnetic Resonance

Year:

2013

Language:

english

File:

PDF, 572 KB

english, 2013

33

Genotypic Evolution ofAcinetobacter baumanniiStrains in an Outbreak Associated With War Trauma

By Glenn Wortmann,, MD, Amy Weintrob,, MD, Melissa Barber,, MLT, Paul Scott,, MD, Scott T. Zoll,, MS, Mark W. Eshoo,, PhD, Rangarajan Sampath,, PhD, David J. Ecker,, PhD, Christian Massire,, PhD

Journal:

Infection Control and Hospital Epidemiology

Year:

2008

Language:

english

File:

PDF, 190 KB

english, 2008

34

On Variant Strategies to Solve the Magnitude Least Squares Optimization Problem in Parallel Transmission Pulse Design and Under Strict SAR and Power Constraints

Hoyos-Idrobo, A., Weiss, P., Massire, A., Amadon, A., Boulant, N.

Journal:

IEEE Transactions on Medical Imaging

Year:

2014

Language:

english

File:

PDF, 1.42 MB

english, 2014

35

Radiofrequency pulse design in parallel transmission under strict temperature constraints

Boulant, Nicolas, Massire, Aurélien, Amadon, Alexis, Vignaud, Alexandre

Journal:

Magnetic Resonance in Medicine

Year:

2014

Language:

english

File:

PDF, 396 KB

english, 2014

36

Broad-Spectrum Biosensor Capable of Detecting and Identifying Diverse Bacterial and Candida Species in Blood

Metzgar, D., Frinder, M., Lovari, R., Toleno, D., Massire, C., Blyn, L. B., Ranken, R., Carolan, H. E., Hall, T. A., Moore, D., Hansen, C. J., Sampath, R., Ecker, D. J.

Journal:

Journal of Clinical Microbiology

Year:

2013

Language:

english

File:

PDF, 3.71 MB

english, 2013

37

Occurrence, Distribution, and Origins of Streptococcus pneumoniae Serotype 6C, a Recently Recognized Serotype

Jacobs, M. R., Bajaksouzian, S., Bonomo, R. A., Good, C. E., Windau, A. R., Hujer, A. M., Massire, C., Melton, R., Blyn, L. B., Ecker, D. J., Sampath, R.

Journal:

Journal of Clinical Microbiology

Year:

2009

Language:

english

File:

PDF, 1.60 MB

english, 2009

38

Rapid PCR/ESI-MS-based molecular genotyping of Staphylococcus aureus from nasal swabs of emergency department patients

Kecojevic, Aleksandar, Ranken, Ray, Ecker, David J, Massire, Christian, Sampath, Rangarajan, Blyn, Lawrence B, Hsieh, Yu-Hsiang, Rothman, Richard E, Gaydos, Charlotte A

Journal:

BMC Infectious Diseases

Year:

2014

Language:

english

File:

PDF, 802 KB

english, 2014

39

Detection, Identification, and Distribution of Fungi in Bronchoalveolar Lavage Specimens by Use of Multilocus PCR Coupled with Electrospray Ionization/Mass Spectrometry

Shin, Jeong Hwan, Ranken, Raymond, Sefers, Susan E., Lovari, Robert, Quinn, Criziel D., Meng, Shufang, Carolan, Heather E., Toleno, Donna, Li, Haijing, Lee, Jeong Nyeo, Stratton, Charles W., Massire,

Journal:

Journal of Clinical Microbiology

Year:

2013

Language:

english

File:

PDF, 135 KB

english, 2013

40

Two-spoke placement optimization under explicit specific absorption rate and power constraints in parallel transmission at ultra-high field

Dupas, Laura, Massire, Aurélien, Amadon, Alexis, Vignaud, Alexandre, Boulant, Nicolas

Journal:

Journal of Magnetic Resonance

Year:

2015

Language:

english

File:

PDF, 1.73 MB

english, 2015

41

PCR Followed by Electrospray Ionization Mass Spectrometry for Broad-Range Identification of Fungal Pathogens

Massire, Christian, Buelow, Daelynn R., Zhang, Sean X., Lovari, Robert, Matthews, Heather E., Toleno, Donna M., Ranken, Raymond R., Hall, Thomas A., Metzgar, David, Sampath, Rangarajan, Blyn, Lawrence

Journal:

Journal of Clinical Microbiology

Year:

2013

Language:

english

File:

PDF, 959 KB

english, 2013

42

Concurrent Serotyping and Genotyping of Pneumococci by Use of PCR and Electrospray Ionization Mass Spectrometry

Massire, Christian, Gertz, Robert E., Svoboda, Pavel, Levert, Keith, Reed, Matthew S., Pohl, Jan, Kreft, Rachel, Li, Feng, White, Neill, Ranken, Ray, Blyn, Larry B., Ecker, David J., Sampath, Rangaraj

Journal:

Journal of Clinical Microbiology

Year:

2012

Language:

english

File:

PDF, 604 KB

english, 2012

43

Rapid Identification of Aspergillus terreus from Bronchoalveolar Lavage Fluid by PCR and Electrospray Ionization with Mass Spectrometry

Modi, D. A., Farrell, J. J., Sampath, R., Bhatia, N. S., Massire, C., Ranken, R., Bonomo, R. A.

Journal:

Journal of Clinical Microbiology

Year:

2012

Language:

english

File:

PDF, 97 KB

english, 2012

44

Rapid Determination of Quinolone Resistance in Acinetobacter spp.

Hujer, K. M., Hujer, A. M., Endimiani, A., Thomson, J. M., Adams, M. D., Goglin, K., Rather, P. N., Pennella, T.-T. D., Massire, C., Eshoo, M. W., Sampath, R., Blyn, L. B., Ecker, D. J., Bonomo, R. A.

Journal:

Journal of Clinical Microbiology

Year:

2009

Language:

english

File:

PDF, 3.36 MB

english, 2009

45

Molecular Characterization of Drug-Resistant Mycobacterium tuberculosis Isolates Circulating in China by Multilocus PCR and Electrospray Ionization Mass Spectrometry

Wang, Feifei, Massire, Christian, Li, Haijing, Cummins, Lendell L., Li, Feng, Jin, Jialin, Fan, Xiaoping, Wang, Sen, Shao, Lingyun, Zhang, Shu, Meng, Shufang, Wu, Jing, Lu, Chanyi, Blyn, Lawrence B.,

Journal:

Journal of Clinical Microbiology

Year:

2011

Language:

english

File:

PDF, 595 KB

english, 2011

46

NAVIGATING THE TMDL PROCESS: ESTIMATING BACKGROUND POLLUTANT LOADS

Massirer, Philip, Ford, Dennis E., Thornton, Kent W., Soerens, Thomas

Journal:

Proceedings of the Water Environment Federation

Year:

2002

Language:

english

File:

PDF, 145 KB

english, 2002

47

Parallel-transmission-enabled three-dimensional T 2 -weighted imaging of the human brain at 7 Tesla

Massire, Aurélien, Vignaud, Alexandre, Robert, Benjamin, Le Bihan, Denis, Boulant, Nicolas, Amadon, Alexis

Journal:

Magnetic Resonance in Medicine

Year:

2015

Language:

english

File:

PDF, 440 KB

english, 2015

48

FID navigator-based MR thermometry method to monitor small temperature changes in the brain of ventilated animals

Boulant, Nicolas, Bottlaender, Michel, Uhrig, Lynn, Giacomini, Eric, Luong, Michel, Amadon, Alexis, Massire, Aurélien, Larrat, Benoît, Vignaud, Alexandre

Journal:

NMR in Biomedicine

Year:

2014

Language:

english

File:

PDF, 636 KB

english, 2014

49

High-resolution multi-parametric quantitative magnetic resonance imaging of the human cervical spinal cord at 7T

Massire, Aurélien, Taso, Manuel, Besson, Pierre, Guye, Maxime, Ranjeva, Jean-Philippe, Callot, Virginie

Journal:

Year:

2016

Language:

english

File:

PDF, 2.20 MB

english, 2016

50

Fatal disseminated Rasamsonia infection in cystic fibrosis post-lung transplantation

Hong, Gina, White, Marissa, Lechtzin, Noah, West, Natalie E., Avery, Robin, Miller, Heather, Lee, Richard, Lovari, Robert J., Massire, Christian, Blyn, Lawrence B., Liang, Xinglun, Sutton, Deanna A.,

Journal:

Journal of Cystic Fibrosis

Year:

2017

Language:

english

File:

PDF, 1.26 MB

english, 2017